PB-Assembly

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Description

pb-assembly website  

pb-assembly is a collection of PacBio software including the following applications and their dependencies:

  • FALCON assembly
  • FALCON-Unzip to phase the genome and perform phased-polishing with Arrow
  • FALCON-Phase to extend phasing between unzipped haplotig blocks (requires HiC data)


Environment Modules

Run module spider pb-assembly to find out what environment modules are available for this application.

System Variables

  • HPC_{{#uppercase:pb-assembly}}_DIR - installation directory





Retrieved from "https://help.rc.ufl.edu/mediawiki/index.php?title=PB-Assembly&oldid=18348"