Difference between revisions of "PB-Assembly"
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Moskalenko (talk | contribs) (Created page with "Category:SoftwareCategory:Biology {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|pb-assembly}} |{{#vardefine:url|https://github.com/PacificBiosciences/pb-assembly}...") |
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Revision as of 15:26, 3 September 2019
Description
pb-assembly is a collection of PacBio software including the following applications and their dependencies:
- FALCON assembly
- FALCON-Unzip to phase the genome and perform phased-polishing with Arrow
- FALCON-Phase to extend phasing between unzipped haplotig blocks (requires HiC data)
Environment Modules
Run module spider pb-assembly
to find out what environment modules are available for this application.
System Variables
- HPC_{{#uppercase:pb-assembly}}_DIR - installation directory