Difference between revisions of "Newbler"
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===Serial=== | ===Serial=== | ||
*{{#var:app}} | *{{#var:app}} | ||
| − | + | ==System Variables== | |
| + | * HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory | ||
* HPC_NEWBLER_BIN - executable directory | * HPC_NEWBLER_BIN - executable directory | ||
<!--Run--> | <!--Run--> | ||
Revision as of 19:22, 10 August 2012
Description
Newbler is a software package for de novo DNA sequence assembly. It is designed specifically for assembling sequence data generated by the 454 GS-series of pyrosequencing platforms sold by 454 Life Sciences, a Roche Diagnostics company.
Required Modules
Serial
- newbler
System Variables
- HPC_{{#uppercase:newbler}}_DIR - installation directory
- HPC_NEWBLER_BIN - executable directory