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nphase website  

nPhase is a ploidy agnostic tool developed in python which predicts the haplotypes of a sample that was sequenced by both long and short reads by aligning them to a reference. It should work with any ploidy

Environment Modules

Run module spider nphase to find out what environment modules are available for this application.

System Variables

  • HPC_NPHASE_DIR - installation directory
  • HPC_NPHASE_BIN - executable directory