Difference between revisions of "MiRge"
Jump to navigation
Jump to search
(Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|mirge}} |{{#vardefine:url|https://github.com/BarasLab/miRge}} <!--CONFIGURAT...") |
Moskalenko (talk | contribs) m (Text replacement - "#uppercase" to "uc") |
||
| Line 24: | Line 24: | ||
Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | ||
==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_BIN - executable directory |
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DOC - documentation directory |
<!--Configuration--> | <!--Configuration--> | ||
Latest revision as of 21:22, 6 December 2019
Description
miRge is a logical, ultrafast, small RNA-seq solution to process samples in a highly multiplexed fashion, resulting in dramatically decreased computational requirements when processing sets of samples in a single run.
Environment Modules
Run module spider mirge to find out what environment modules are available for this application.
System Variables
- HPC_MIRGE_DIR - installation directory
- HPC_MIRGE_BIN - executable directory
- HPC_MIRGE_DOC - documentation directory
Citation
If you publish research that uses mirge you have to cite it as follows:
https://www.ncbi.nlm.nih.gov/pubmed/26571139