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megraft website  

A software package to graft ribosomal small subunit (16S/18S) fragments onto full-length sequences for accurate species richness and sequencing depth analysis in pyrosequencing-length metagenomes

Required Modules


  • megraft

Parallel (OpenMP)

  • intel
  • megraft

Parallel (MPI)

  • intel
  • openmpi
  • megraft


System Variables

  • HPC_{{#uppercase:megraft}}_DIR - installation directory


If you publish research that uses megraft you have to cite it as follows:

Johan Bengtsson, Martin Hartmann, Martin Unterseher, Parag Vaishampayan, Kessy Abarenkov, Lisa Durso, Elisabeth M. Bik, James R. Garey, K. Martin Eriksson, R. Henrik Nilsson Published in Research in Microbiology. Volume 163, Issues 6–7 (2012), 407–412 doi: 10.1016/j.resmic.2012.07.001.