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megalodon website  

Megalodon is a research command line tool to extract high accuracy modified base and sequence variant calls from raw nanopore reads by anchoring the information rich basecalling neural network output to a reference genome/transcriptome.

Environment Modules

Run module spider megalodon to find out what environment modules are available for this application.

System Variables

  • HPC_MEGALODON_DIR - installation directory
  • HPC_MEGALODON_BIN - executable directory