Difference between revisions of "MPBoot"

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(Created page with "Category:SoftwareCategory:BiologyCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|mpboot}} |{{#vardefine:url|https://github.com/diepthihoa...")
 
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Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
 
Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
 
==System Variables==
 
==System Variables==
* HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory
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* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
* HPC_{{#uppercase:{{#var:app}}}}_BIN - executable directory
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* HPC_{{uc:{{#var:app}}}}_BIN - executable directory
* HPC_{{#uppercase:{{#var:app}}}}_DOC - documentantion directory
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* HPC_{{uc:{{#var:app}}}}_DOC - documentantion directory
  
 
<!--Configuration-->
 
<!--Configuration-->

Latest revision as of 21:21, 6 December 2019

Description

mpboot website  

MPBoot is an efficient program for parsimony analysis. The program can reconstruct maximum parsimony trees for large DNA and protein sequence alignments. More importantly, it implements the method MPBoot for approximating maximum parsimony bootstrap. The method was inspired by the ultrafast bootstrap approximation for maximum likelihood

Environment Modules

Run module spider mpboot to find out what environment modules are available for this application.

System Variables

  • HPC_MPBOOT_DIR - installation directory
  • HPC_MPBOOT_BIN - executable directory
  • HPC_MPBOOT_DOC - documentantion directory