Difference between revisions of "MEME"

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[[Category:Software]][[Category:Biology]][[Category:Bioinformatics]][[Category:Sequencing]]
 
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Latest revision as of 15:09, 27 May 2022

Description

meme website  
The MEME Suite allows you to:

  • Discover motifs using MEME or GLAM2 on groups of related DNA or protein sequences.
  • Search sequence databases using motifs.
  • Compare a motif to all motifs in a database of motifs, and.
  • Associate motifs with Gene Ontology terms via their putative target genes.


Environment Modules

Run module spider meme to find out what environment modules are available for this application.

System Variables

  • HPC_MEME_DIR - installation directory
  • HPC_MEME_BIN - executable directory
  • HPC_MEME_DOC - documentation directory