Difference between revisions of "LTRRetriever"

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(Created page with "Category:SoftwareCategory:biologyCategory:phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|LTRRetriever}} |{{#vardefine:url|https://github.com/oush...")
 
m (Text replacement - "#uppercase" to "uc")
 
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Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
 
Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
 
==System Variables==
 
==System Variables==
* HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory
+
* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
 
* HPC_LTRRETRIEVER_BIN - executable directory
 
* HPC_LTRRETRIEVER_BIN - executable directory
 
* HPC_LTRRETRIEVER_DOC - documentation directory
 
* HPC_LTRRETRIEVER_DOC - documentation directory

Latest revision as of 21:21, 6 December 2019

Description

LTRRetriever website  

Description: for identification of LTR retrotransposons

Environment Modules

Run module spider LTRRetriever to find out what environment modules are available for this application.

System Variables

  • HPC_LTRRETRIEVER_DIR - installation directory
  • HPC_LTRRETRIEVER_BIN - executable directory
  • HPC_LTRRETRIEVER_DOC - documentation directory
  • HPC_LTRRETRIEVER_DBD - database directory