Kaiju
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Description
Kaiju is a program for the taxonomic classification of high-throughput sequencing reads, e.g., Illumina or Roche/454, from whole-genome sequencing of metagenomic DNA. Reads are directly assigned to taxa using the NCBI taxonomy and a reference database of protein sequences from microbial and viral genomes.
Environment Modules
Run module spider kaiju to find out what environment modules are available for this application.
System Variables
- HPC_{{#uppercase:kaiju}}_DIR - installation directory
- HPC_{{#uppercase:kaiju}}_BIN - executable directory