Difference between revisions of "JACUSA"
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(Created page with "Category:SoftwareCategory:BiologyCategory:NGS {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|jacusa}} |{{#vardefine:url|https://github.com/dieterich-lab/JACUSA...") |
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| − | [[Category:Software]][[Category:Biology]][[Category:NGS]] | + | [[Category:Software]][[Category:Biology]][[Category:NGS]][[Category:Phylogenetics]] |
{|<!--CONFIGURATION: REQUIRED--> | {|<!--CONFIGURATION: REQUIRED--> | ||
|{{#vardefine:app|jacusa}} | |{{#vardefine:app|jacusa}} | ||
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|{{#vardefine:testing|}} <!--PROFILING--> | |{{#vardefine:testing|}} <!--PROFILING--> | ||
|{{#vardefine:faq|}} <!--FAQ--> | |{{#vardefine:faq|}} <!--FAQ--> | ||
| − | |{{#vardefine:citation| | + | |{{#vardefine:citation|}} <!--CITATION--> |
|{{#vardefine:installation|}} <!--INSTALLATION--> | |{{#vardefine:installation|}} <!--INSTALLATION--> | ||
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<!--Modules--> | <!--Modules--> | ||
| − | == | + | ==Environment Modules== |
| − | + | Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | |
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==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
<!--Configuration--> | <!--Configuration--> | ||
{{#if: {{#var: conf}}|==Configuration== | {{#if: {{#var: conf}}|==Configuration== | ||
Latest revision as of 19:08, 15 August 2022
Description
JACUSA - JAVA framework for accurate SNV assessment
Environment Modules
Run module spider jacusa to find out what environment modules are available for this application.
System Variables
- HPC_JACUSA_DIR - installation directory