Difference between revisions of "Irep"

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[[Category:Software]][[Category:Bioinformatics]][[Category:Genomics]]
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[[Category:Software]][[Category:Biology]][[Category:Genomics]]
 
{|<!--CONFIGURATION: REQUIRED-->
 
{|<!--CONFIGURATION: REQUIRED-->
 
|{{#vardefine:app|irep}}
 
|{{#vardefine:app|irep}}

Latest revision as of 19:23, 12 August 2022

Description

irep website  

iRep is a method for determining replication rates for bacteria from single time point metagenomics sequencing and draft-quality genomes.

Environment Modules

Run module spider irep to find out what environment modules are available for this application.

System Variables

  • HPC_IREP_DIR - installation directory
  • HPC_IREP_BIN - executable directory




Citation

If you publish research that uses irep you have to cite it as follows:

Measurement of bacterial replication rates in microbial communities