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itsx website  

ITSx: Improved software detection and extraction of ITS1 and ITS2 from ribosomal ITS sequences of fungi and other eukaryotes for use in environmental sequencing

Environment Modules

Run module spider itsx to find out what environment modules are available for this application.

System Variables

  • HPC_ITSX_DIR - installation directory
  • HPC_ITSX_BIN - executable directory


If you publish research that uses itsx you have to cite it as follows:

Methods in Ecology and Evolution, 4: 914-919, 2013 (DOI: 10.1111/2041-210X.12073)