Difference between revisions of "ITK"
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[[Category:Software]][[Category:Bioinformatics]][[Category:Genomics]] | [[Category:Software]][[Category:Bioinformatics]][[Category:Genomics]] | ||
{|<!--Main settings - REQUIRED--> | {|<!--Main settings - REQUIRED--> | ||
− | |{{#vardefine:app| | + | |{{#vardefine:app|ITK}} |
|{{#vardefine:url|http://www.itk.org}} | |{{#vardefine:url|http://www.itk.org}} | ||
|{{#vardefine:exe|}} <!--Present manual instructions for running the software --> | |{{#vardefine:exe|}} <!--Present manual instructions for running the software --> | ||
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[[Modules|modules documentation]] | [[Modules|modules documentation]] | ||
===Serial=== | ===Serial=== | ||
− | *{{#var:app}} | + | *intel |
+ | *{{lc:{{#var:app}}}} | ||
==System Variables== | ==System Variables== | ||
− | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
− | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_LIB - library directory |
− | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_INC - include file directory |
− | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_BIN - executable program directory |
{{#if: {{#var: exe}}|==How To Run== | {{#if: {{#var: exe}}|==How To Run== | ||
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*'''Q:''' **'''A:'''|}} | *'''Q:''' **'''A:'''|}} | ||
{{#if: {{#var: citation}}|==Citation== | {{#if: {{#var: citation}}|==Citation== | ||
− | If you publish research that uses | + | If you publish research that uses ITK you have to cite it as follows: |
T.S. Yoo, M. J. Ackerman, W. E. Lorensen, W. Schroeder, V. Chalana, S. Aylward, D. Metaxas, R. Whitaker. Engineering and Algorithm Design for an Image Processing API: A Technical Report on ITK - The Insight Toolkit. In Proc. of Medicine Meets Virtual Reality, J. Westwood, ed., IOS Press Amsterdam pp 586-592 (2002). | T.S. Yoo, M. J. Ackerman, W. E. Lorensen, W. Schroeder, V. Chalana, S. Aylward, D. Metaxas, R. Whitaker. Engineering and Algorithm Design for an Image Processing API: A Technical Report on ITK - The Insight Toolkit. In Proc. of Medicine Meets Virtual Reality, J. Westwood, ed., IOS Press Amsterdam pp 586-592 (2002). | ||
|}} | |}} | ||
+ | =Validation= | ||
+ | * Validated 4/5/2018 |
Revision as of 21:31, 6 December 2019
Description
ITK website
ITK is an open-source, cross-platform system that provides developers with an extensive suite of software tools for image analysis. Developed through extreme programming methodologies, ITK employs leading-edge algorithms for registering and segmenting multidimensional data.
Required Modules
Serial
- intel
- itk
System Variables
- HPC_ITK_DIR - installation directory
- HPC_ITK_LIB - library directory
- HPC_ITK_INC - include file directory
- HPC_ITK_BIN - executable program directory
Citation
If you publish research that uses ITK you have to cite it as follows: T.S. Yoo, M. J. Ackerman, W. E. Lorensen, W. Schroeder, V. Chalana, S. Aylward, D. Metaxas, R. Whitaker. Engineering and Algorithm Design for an Image Processing API: A Technical Report on ITK - The Insight Toolkit. In Proc. of Medicine Meets Virtual Reality, J. Westwood, ed., IOS Press Amsterdam pp 586-592 (2002).
Validation
- Validated 4/5/2018