Difference between revisions of "HapQTL"

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[[Category:Software]][[Category:Biology]][[Category:Genomics]]
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[[Category:Software]][[Category:Biology]]
 
{|<!--CONFIGURATION: REQUIRED-->
 
{|<!--CONFIGURATION: REQUIRED-->
 
|{{#vardefine:app|hapqtl}}
 
|{{#vardefine:app|hapqtl}}
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<!--Modules-->
 
<!--Modules-->
==Required Modules==
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==Environment Modules==
 
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Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
===Serial===
 
* gcc/5.2.0
 
* {{#var:app}}
 
<!--
 
===Parallel (OpenMP)===
 
* intel
 
* {{#var:app}}
 
===Parallel (MPI)===
 
* intel
 
* openmpi
 
* {{#var:app}}
 
-->
 
 
==System Variables==
 
==System Variables==
* HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory
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* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
 
<!--Configuration-->
 
<!--Configuration-->
 
{{#if: {{#var: conf}}|==Configuration==
 
{{#if: {{#var: conf}}|==Configuration==

Latest revision as of 18:15, 15 August 2022

Description

hapqtl website  

hapQTL: haplotype Quantitative Loci This software performs association testing between local haplotypes and phenotypes at each core marker.

Environment Modules

Run module spider hapqtl to find out what environment modules are available for this application.

System Variables

  • HPC_HAPQTL_DIR - installation directory