Difference between revisions of "Grf"

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(Created page with "Category:SoftwareCategory:biology {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|grf}} |{{#vardefine:url|https://github.com/bioinfolabmu/GenericRepeatFinder}} <!--...")
 
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Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
 
Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
 
==System Variables==
 
==System Variables==
* HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory
+
* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
 
<!--Configuration-->
 
<!--Configuration-->
 
{{#if: {{#var: conf}}|==Configuration==
 
{{#if: {{#var: conf}}|==Configuration==

Revision as of 21:20, 6 December 2019

Description

grf website  

Generic Repeat Finder (GRF) is a program for detecting terminal inverted repeats (TIRs), terminal direct repeats (TDRs), interspersed repeats, miniature inverted repeat transposable elements (MITEs), and long terminal repeat (LTR) transposons in genomes.

If you have any question or comment, please contact Dr. Chun Liang (liangc@miamioh.edu).

Environment Modules

Run module spider grf to find out what environment modules are available for this application.

System Variables

  • HPC_GRF_DIR - installation directory