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ggsashimi website  

Command-line tool for the visualization of splicing events across multiple samples

Environment Modules

Run module spider ggsashimi to find out what environment modules are available for this application.

System Variables

  • HPC_GGSASHIMI_DIR - installation directory
  • HPC_GGSASHIMI_BIN - executable directory


If you publish research that uses ggsashimi you have to cite it as follows:

Garrido-Martín, D., Palumbo, E., Guigó, R., & Breschi, A. (2018). ggsashimi: Sashimi plot revised for browser-and annotation-independent splicing visualization. PLoS computational biology, 14(8), e1006360.