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gapcloser website  

GapCloser v1.12 for SOAPdenovo. The GapCloser is designed to close the gaps emerging during the scaffolding process by SOAPdenovo or other assembler, using the abundant pair relationships of short reads.

Environment Modules

Run module spider gapcloser to find out what environment modules are available for this application.

System Variables

  • HPC_GAPCLOSER_DIR - installation directory