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gphocs website  

G-PhoCS is a software package for inferring ancestral population sizes, population divergence times, and migration rates from individual genome sequences. G-PhoCS accepts as input a set of multiple sequence alignments from separate neutrally evolving loci along the genome. Parameter inference is done in a Bayesian manner, using a Markov Chain Monte Carlo (MCMC) to jointly sample model parameters and genealogies at the input loci.

Environment Modules

Run module spider gphocs to find out what environment modules are available for this application.

System Variables

  • HPC_GPHOCS_DIR - installation directory
  • HPC_GPHOCS_BIN - executable directory