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gffex website  

GFF-Ex (gffex) is a Genome Feature extraction package which extracts Gene, Exon, Intron, Upstream Region of Gene (Promoters), Intergenic and CDS/cDNA sequences by just tweeting in the Genome Feature File (gff,gtf) along with the corresponding genome/chromosome.

Environment Modules

Run module spider gffex to find out what environment modules are available for this application.

System Variables

  • HPC_GFFEX_DIR - installation directory
  • HPC_GFFEX_BIN - executable directory