Difference between revisions of "Fiji"

From UFRC
Jump to navigation Jump to search
(Created page with "Category:Software {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|fiji}} |{{#vardefine:url|https://fiji.sc}} <!--CONFIGURATION: OPTIONAL (|1}} means it's ON)--> |{{#var...")
 
 
(One intermediate revision by one other user not shown)
Line 1: Line 1:
[[Category:Software]]
+
[[Category:Software]][[Category:Image Processing]]
 
{|<!--CONFIGURATION: REQUIRED-->
 
{|<!--CONFIGURATION: REQUIRED-->
 
|{{#vardefine:app|fiji}}
 
|{{#vardefine:app|fiji}}
Line 26: Line 26:
 
Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
 
Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
 
==System Variables==
 
==System Variables==
* HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory
+
* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
 
<!--Configuration-->
 
<!--Configuration-->
 
{{#if: {{#var: conf}}|==Configuration==
 
{{#if: {{#var: conf}}|==Configuration==

Latest revision as of 16:42, 15 August 2022

Description

fiji website  

Fiji is an image processing package—a "batteries-included" distribution of ImageJ, bundling a lot of plugins which facilitate scientific image analysis.

Environment Modules

Run module spider fiji to find out what environment modules are available for this application.

System Variables

  • HPC_FIJI_DIR - installation directory