Difference between revisions of "Fastix"
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Moskalenko (talk | contribs) (Created page with "Category:SoftwareCategory:BiologyCategory:NGS {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|fastix}} |{{#vardefine:url|https://github.com/ekg/fastix}} <!--CON...") |
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Latest revision as of 19:38, 10 May 2021
Description
Prefix-renaming FASTA records really fast.
Example:
fastix -p 'grch38#' <(zcat GCA_000001405.15_GRCh38_no_alt_analysis_set.fna.gz)
Environment Modules
Run module spider fastix to find out what environment modules are available for this application.
System Variables
- HPC_FASTIX_DIR - installation directory