Difference between revisions of "EMBOSS"
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{{#if: {{#var: exe}}|==How To Run== | {{#if: {{#var: exe}}|==How To Run== | ||
EMBOSS is available both at the command line for use in the batch jobs and through the [[Galaxy]] Framework for Biocomputing. | EMBOSS is available both at the command line for use in the batch jobs and through the [[Galaxy]] Framework for Biocomputing. | ||
Revision as of 17:21, 10 August 2012
Description
EMBOSS is "The European Molecular Biology Open Software Suite". EMBOSS is a free Open Source software analysis package specially developed for the needs of the molecular biology (e.g. EMBnet) user community. The software automatically copes with data in a variety of formats and even allows transparent retrieval of sequence data from the web. Also, as extensive libraries are provided with the package, it is a platform to allow other scientists to develop and release software in true open source spirit. EMBOSS also integrates a range of currently available packages and tools for sequence analysis into a seamless whole. EMBOSS breaks the historical trend towards commercial software packages.
Required Modules
Serial
- emboss
System Variables
- HPC_{{#uppercase:emboss}}_DIR - installation directory
How To Run
EMBOSS is available both at the command line for use in the batch jobs and through the Galaxy Framework for Biocomputing.