Difference between revisions of "Deepfri"
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Latest revision as of 19:30, 10 March 2023
Description
Deep functional residue identification.
Environment Modules
Run module spider deepfri to find out what environment modules are available for this application.
System Variables
- HPC_DEEPFRI_DIR - installation directory
- HPC_DEEPFRI_BIN - executable directory
Citation
If you publish research that uses deepfri you have to cite it as follows:
Gligorijević, V., Renfrew, P. D., Kosciolek, T., Leman, J. K., Berenberg, D., Vatanen, T., Chandler, C., Taylor, B. C., Fisk, I. M., Vlamakis, H., Xavier, R. J., Knight, R., Cho, K., & Bonneau, R. (2021). Structure-based protein function prediction using graph convolutional networks. Nature Communications. https://doi.org/10.1038/s41467-021-23303-9