Difference between revisions of "Crux"
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Moskalenko (talk | contribs) m (Text replacement - "#uppercase" to "uc") |
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==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_BIN - executable directory |
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DOC - html documentation directory |
<!--Configuration--> | <!--Configuration--> | ||
{{#if: {{#var: conf}}|==Configuration== | {{#if: {{#var: conf}}|==Configuration== | ||
Revision as of 21:07, 6 December 2019
Description
Crux is a software toolkit for tandem mass spectrometry analysis, with a focus on peptide identification.
Required Modules
System Variables
- HPC_CRUX_DIR - installation directory
- HPC_CRUX_BIN - executable directory
- HPC_CRUX_DOC - html documentation directory
Citation
If you publish research that uses crux you have to cite it as follows:
Christopher Y. Park, Aaron A. Klammer, Lukas Käll, Michael J. MacCoss and William Stafford Noble. "Rapid and accurate peptide identification from tandem mass spectra." Journal of Proteome Research. 7(7):3022--3027, 2008.
Validation
- Validated 4/5/2018