Difference between revisions of "Connectomemapper3"

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[[Category:Software]][[Category:Image Processing]]
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[[Category:Software]][[Category:Phylogenetics]]
 
{|<!--CONFIGURATION: REQUIRED-->
 
{|<!--CONFIGURATION: REQUIRED-->
 
|{{#vardefine:app|connectomemapper3}}
 
|{{#vardefine:app|connectomemapper3}}
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{{App_Description|app={{#var:app}}|url={{#var:url}}|name={{#var:app}}}}|}}
 
{{App_Description|app={{#var:app}}|url={{#var:url}}|name={{#var:app}}}}|}}
  
Connectome Mapper 3 is an open-source Python3 image processing pipeline software that implements full anatomical, diffusion and resting-state MRI processing pipelines, from raw Diffusion / T1 / T2 / BOLD data to multi-resolution connection matrices.
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Connectome Mapper 3 implements a full diffusion MRI processing pipeline that understands BIDS datasets, from raw Diffusion / T1 / T2 data to multi-resolution connection matrices. The Connectome Mapper 3 is part of the Connectome Mapping Toolkit.
  
 
<!--Modules-->
 
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==System Variables==
 
==System Variables==
 
* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
 
* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
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* HPC_{{uc:{{#var:app}}}}_BIN - executable directory
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<!--Configuration-->
 
<!--Configuration-->
 
{{#if: {{#var: conf}}|==Configuration==
 
{{#if: {{#var: conf}}|==Configuration==

Latest revision as of 13:55, 15 August 2022

Description

connectomemapper3 website  

Connectome Mapper 3 implements a full diffusion MRI processing pipeline that understands BIDS datasets, from raw Diffusion / T1 / T2 data to multi-resolution connection matrices. The Connectome Mapper 3 is part of the Connectome Mapping Toolkit.

Environment Modules

Run module spider connectomemapper3 to find out what environment modules are available for this application.

System Variables

  • HPC_CONNECTOMEMAPPER3_DIR - installation directory
  • HPC_CONNECTOMEMAPPER3_BIN - executable directory