Difference between revisions of "CBGpipe"

From UFRC
Jump to navigation Jump to search
(Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|CCBGpipe}} |{{#vardefine:url|https://github.com/jade-nhri/CCBGpipe}} <!--CON...")
 
(No difference)

Latest revision as of 21:59, 26 August 2020

Description

CCBGpipe website  

This pipeline is designed to complete circular bacterial genomes using a sampling strategy from a sinlge MinION with barcoding

Environment Modules

Run module spider CCBGpipe to find out what environment modules are available for this application.

System Variables

  • HPC_CCBGPIPE_DIR - installation directory
  • HPC_CCBGPIPE_BIN - executable directory