Difference between revisions of "CAVIAR"
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Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | ||
==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_BIN - executable directory |
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_EXE - sample data directory |
<!--Configuration--> | <!--Configuration--> | ||
Latest revision as of 21:17, 6 December 2019
Description
CAVIAR (CAusal Variants Identication in Associated Regions): a statistical framework that quantifies the probability of each variant to be causal while allowing with arbitrary number of causal variants.
Environment Modules
Run module spider caviar to find out what environment modules are available for this application.
System Variables
- HPC_CAVIAR_DIR - installation directory
- HPC_CAVIAR_BIN - executable directory
- HPC_CAVIAR_EXE - sample data directory