Bamtools

From UFRC
Revision as of 16:55, 10 August 2012 by Moskalenko (talk | contribs) (Text replace - "{{#if: {{#var: mod}}|==Execution Environment and Modules== {{App_Module|app={{#var:app}}|intel={{#var:intel}}|mpi={{#var:mpi}}}}|}}" to "==Required Modules== modules documentation ===Serial=== *{{#var:app}}")
Jump to navigation Jump to search

Description

bamtools website  

BamTools is a project that provides both a C++ API and a command-line toolkit for reading, writing, and manipulating BAM (genome alignment) files.

Required Modules

modules documentation

Serial

  • bamtools
  • HPC_BAMTOOLS_BIN - executable directory
  • HPC_BAMTOOLS_INC - includes directory

Additional tools

We also provide small tools that depend on bamtools or are built against it within this module.

  • bamaddrg (2012-01-27 build against bamtools 0.9.4).




Retrieved from "https://help.rc.ufl.edu/mediawiki/index.php?title=Bamtools&oldid=8097"