Difference between revisions of "Bamtools"
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Moskalenko (talk | contribs) m (Text replace - "Usage policy" to "Usage Policy") |
Moskalenko (talk | contribs) m (Text replace - "{{#if: {{#var: mod}}|==Execution Environment and Modules== {{App_Module|app={{#var:app}}|intel={{#var:intel}}|mpi={{#var:mpi}}}}|}}" to "==Required Modules== modules documentation ===Serial=== *{{#var:app}}") |
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| − | + | ==Required Modules== | |
| − | + | [[Modules|modules documentation]] | |
| + | ===Serial=== | ||
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* HPC_BAMTOOLS_BIN - executable directory | * HPC_BAMTOOLS_BIN - executable directory | ||
* HPC_BAMTOOLS_INC - includes directory | * HPC_BAMTOOLS_INC - includes directory | ||
Revision as of 16:55, 10 August 2012
Description
BamTools is a project that provides both a C++ API and a command-line toolkit for reading, writing, and manipulating BAM (genome alignment) files.
Required Modules
Serial
- bamtools
- HPC_BAMTOOLS_BIN - executable directory
- HPC_BAMTOOLS_INC - includes directory
Additional tools
We also provide small tools that depend on bamtools or are built against it within this module.
- bamaddrg (2012-01-27 build against bamtools 0.9.4).