Difference between revisions of "Bamsnap"

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[[Category:Software]][[Category:Phylogenetics
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[[Category:Software]][[Category:Phylogenetics]]
 
{|<!--CONFIGURATION: REQUIRED-->
 
{|<!--CONFIGURATION: REQUIRED-->
|{{#vardefine:app|Bamsnap}}
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|{{#vardefine:app|bamsnap}}
 
|{{#vardefine:url|https://github.com/parklab/bamsnap}}
 
|{{#vardefine:url|https://github.com/parklab/bamsnap}}
 
<!--CONFIGURATION: OPTIONAL (|1}} means it's ON)-->
 
<!--CONFIGURATION: OPTIONAL (|1}} means it's ON)-->
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{{App_Description|app={{#var:app}}|url={{#var:url}}|name={{#var:app}}}}|}}
 
{{App_Description|app={{#var:app}}|url={{#var:url}}|name={{#var:app}}}}|}}
  
A lightweight command-based visualization tool for sequencing reads in BAM files
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BamSnap: a lightweight command-based visualization tool for sequencing reads in BAM files
  
 
<!--Modules-->
 
<!--Modules-->
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==System Variables==
 
==System Variables==
 
* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
 
* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
 +
* HPC_{{uc:{{#var:app}}}}_BIN - executable directory
 +
 
<!--Configuration-->
 
<!--Configuration-->
 
{{#if: {{#var: conf}}|==Configuration==
 
{{#if: {{#var: conf}}|==Configuration==

Latest revision as of 16:14, 27 May 2022

Description

bamsnap website  

BamSnap: a lightweight command-based visualization tool for sequencing reads in BAM files

Environment Modules

Run module spider bamsnap to find out what environment modules are available for this application.

System Variables

  • HPC_BAMSNAP_DIR - installation directory
  • HPC_BAMSNAP_BIN - executable directory