Difference between revisions of "AtomEye"

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(Created page with "Category:SoftwareCategory:Material Science and EngineeringCategory:Engineering {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|AtomEye}} |{{#vardefine:url|http:...")
 
 
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{|<!--CONFIGURATION: REQUIRED-->
 
{|<!--CONFIGURATION: REQUIRED-->
 
|{{#vardefine:app|AtomEye}}
 
|{{#vardefine:app|AtomEye}}
 
|{{#vardefine:url|http://li.mit.edu/Archive/Graphics/A/}}
 
|{{#vardefine:url|http://li.mit.edu/Archive/Graphics/A/}}
 
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|{{#vardefine:exe|}} <!--RUNNING -->
 
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==Required Modules==
 
==Required Modules==
 
[[Modules|modules documentation]]
 
[[Modules|modules documentation]]
*python
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*intel
*{{#var:app}}
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*{{lc:{{#var:app}}}}
 
==System Variables==
 
==System Variables==
* HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory
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* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
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* HPC_{{uc:{{#var:app}}}}_BIN - executable program directory
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* HPC_{{uc:{{#var:app}}}}_LIB - library directory
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* HPC_{{uc:{{#var:app}}}}_INC - include directory
  
 
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{{#if: {{#var: citation}}|==Citation==
 
{{#if: {{#var: citation}}|==Citation==
 
If you publish research that uses {{#var:app}} you have to cite it as follows:
 
If you publish research that uses {{#var:app}} you have to cite it as follows:
DOUBLE_CLICK_TO_WRITE_CITATION_HERE
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J. Li, AtomEye: an efficient atomistic configuration viewer, Modeling Simulation in Material Science Engineering, 11 (2003) 173-177
 
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<!--Installation-->
 
<!--Installation-->

Latest revision as of 15:21, 12 August 2022

Description

AtomEye website  

AtomEye is free atomistic visualization software for all major UNIX platforms. It is based on a newly developed graphics core library of higher quality than the X-window standard, with area-weighted anti-aliasing. An order-N neighbourlist algorithm is used to compute the bond connectivity. The functionalities of AtomEye include: parallel and perspective projections with full three-dimensional navigation; customizable bond and coordination number calculation; colour-encoding of arbitrary user-defined quantities; local atomic strain invariant; coloured atom tiling and tracing; up to 16 cutting planes; periodic boundary condition translations; high-quality JPEG, PNG and EPS screenshots; and animation scripting.

Required Modules

modules documentation

  • intel
  • atomeye

System Variables

  • HPC_ATOMEYE_DIR - installation directory
  • HPC_ATOMEYE_BIN - executable program directory
  • HPC_ATOMEYE_LIB - library directory
  • HPC_ATOMEYE_INC - include directory





Citation

If you publish research that uses AtomEye you have to cite it as follows:

J. Li, AtomEye: an efficient atomistic configuration viewer, Modeling Simulation in Material Science Engineering, 11 (2003) 173-177