Difference between revisions of "Anvio"

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(Created page with "Category:SoftwareCategory:BiologyCategory:Microbial 'omics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|anvio}} |{{#vardefine:url|https://github.com/meren/an...")
 
 
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[[Category:Software]][[Category:Biology]][[Category:Microbial 'omics]]
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[[Category:Software]][[Category:Biology]]
 
{|<!--CONFIGURATION: REQUIRED-->
 
{|<!--CONFIGURATION: REQUIRED-->
 
|{{#vardefine:app|anvio}}
 
|{{#vardefine:app|anvio}}
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{{App_Description|app={{#var:app}}|url={{#var:url}}|name={{#var:app}}}}|}}
 
{{App_Description|app={{#var:app}}|url={{#var:url}}|name={{#var:app}}}}|}}
  
Anvi’o is an analysis and visualization platform for ‘omics data.
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Anvio is an analysis and visualization platform for ‘omics data.
  
 
<!--Modules-->
 
<!--Modules-->
==Required Modules==
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==Environment Modules==
 
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Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
===Serial===
 
* {{#var:app}}
 
<!--
 
===Parallel (OpenMP)===
 
* intel
 
* {{#var:app}}
 
===Parallel (MPI)===
 
* intel
 
* openmpi
 
* {{#var:app}}
 
-->
 
 
==System Variables==
 
==System Variables==
* HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory
+
* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
 
<!--Configuration-->
 
<!--Configuration-->
 
{{#if: {{#var: conf}}|==Configuration==
 
{{#if: {{#var: conf}}|==Configuration==

Latest revision as of 14:20, 12 August 2022

Description

anvio website  

Anvio is an analysis and visualization platform for ‘omics data.

Environment Modules

Run module spider anvio to find out what environment modules are available for this application.

System Variables

  • HPC_ANVIO_DIR - installation directory