Pairtools

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Description

Pairtools website  

A command-line framework for handling Hi-C read-pair data. Pairtools is a flexible toolkit designed for processing, filtering, and analyzing Hi-C sequencing data. It enables efficient handling of paired-end reads, allowing for rapid processing and quality control.

Environment Modules

Run module spider pairtools to find out what environment modules are available for this application.

System Variables

  • HPC_PAIRTOOLS_DIR - installation directory





Retrieved from "https://help.rc.ufl.edu/mediawiki/index.php?title=Pairtools&oldid=29248"