Scapp

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Description

scapp website  

SCAPP assembles plasmids from metagenomic assembly graphs.

Environment Modules

Run module spider scapp to find out what environment modules are available for this application.

System Variables

  • HPC_SCAPP_DIR - installation directory
  • HPC_SCAPP_BIN - executable directory




Citation

If you publish research that uses scapp you have to cite it as follows:

Pellow, D., Zorea, A., Probst, M. et al. SCAPP: an algorithm for improved plasmid assembly in metagenomes. Microbiome 9, 144 (2021).


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