Read2tree
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Description
read2tree is a software tool that allows users to obtain alignment matrices for tree inference. It makes use of the OMA database and a set of reads and allows a user to bypass several standard steps, including read filtering, assembly, gene prediction, gene annotation, all vs. all comparisons, orthology prediction, alignment, and concatenation.
Environment Modules
Run module spider read2tree to find out what environment modules are available for this application.
System Variables
- HPC_READ2TREE_DIR - installation directory
- HPC_READ2TREE_BIN - executable directory