CLIPper

Description

clipper website  

CLIPper - CLIP peak enrichment recognition

A tool to detect CLIP-seq peaks.

Environment Modules

Run module spider clipper to find out what environment modules are available for this application.

System Variables

• HPC_CLIPPER_DIR - installation directory
• HPC_CLIPPER_BIN - executable directory

Citation

If you publish research that uses clipper you have to cite it as follows:

Lovci et. al. Rbfox proteins regulate alternative mRNA splicing through evolutionarily conserved RNA bridges. Nat Struct Mol Biol. 2013 Dec;20(12):1434-42. doi: 10.1038/nsmb.2699. Epub 2013 Nov 10.