Piranha

From UFRC
Revision as of 16:02, 10 June 2022 by Israel.herrera (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to navigation Jump to search

Description

piranha website  

Piranha is a peak-caller for CLIP- and RIP-Seq data. It takes input in BED or BAM format and identifies regions of statistically significant read enrichment. Additional covariates may optionally be provided to further inform the peak-calling process.

Environment Modules

Run module spider piranha to find out what environment modules are available for this application.

System Variables

  • HPC_PIRANHA_DIR - installation directory