MONAI label

Description

MONAI label website  

MONAI Label is an intelligent open source image labeling and learning tool that enables users to create annotated datasets and build AI annotation models for clinical evaluation. MONAI Label enables application developers to build labeling apps in a serverless way, where custom labeling apps are exposed as a service through the MONAI Label Server.

USAGE:

     1) Server:
     To start the server as a slurm job:
     sbatch start_monai_server_readonly.sh
     Note server address from job output: used in next step

     2) 3DSlicer client
     - Start Open On Demand (OOD) session
     - Start Console in hwgui with 1 GPU: gpu:geforce:1
     - In console: load & start Slicer
         ml slicer/4.13.0
         Slicer
     - In Slicer GUI:
         Select module: Active Learning -> MONAILabel
         Fill in server address, e.g.: http://c1007a-s17:8000/
         Click on refresh button next to server address
         Load Next Sample
         

You are good to go! Enjoy!

Environment Modules

Run module spider MONAI label to find out what environment modules are available for this application.

System Variables

• HPC_MONAI LABEL_DIR - installation directory