BIOMART
Revision as of 16:17, 27 May 2022 by Israel.herrera (talk | contribs)
Description
Tables of Ensembl data can be downloaded via the highly customisable BioMart data mining tool. The BioMart Perl API allow you to go a step further with BioMart and allow you to integrate BioMart Perl Code into custom Perl scripts.
Required Modules
Serial
- biomart
System Variables
- HPC_BIOMART_DIR - installation directory
- HPC_BIOMART_BIN - executable directory
- HPC_BIOMART_CONF - configuration directory
Additional Information
Download the default BioMart Registry and save it as an xml file to be used with the biomart API scripts.