AnnoTALE

Description

annotale website  

AnnoTALE is a suite of applications for identifying and analysing TALEs in Xanthomonas genomes, for clustering TALEs into classes by their RVD sequences, for assigning novel TALEs to existing classes, for proposing TALE names using a unified nomenclature, and for predicting targets of individual TALEs and TALE classes.

Environment Modules

Run module spider annotale to find out what environment modules are available for this application.

System Variables

• HPC_ANNOTALE_DIR - installation directory
• HPC_ANNOTALE_BIN - executable directory

Citation

If you publish research that uses annotale you have to cite it as follows:

Jan Grau, Maik Reschke, Annett Erkes, Jana Streubel, Richard D. Morgan, Geoffrey G. Wilson, Ralf Koebnik and Jens Boch. AnnoTALE: bioinformatics tools for identification, annotation, and nomenclature of TALEs from Xanthomonas genomic sequences. Scientific Reports 6:21077, DOI: 10.1038/srep21077, 2016.