JCVI

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Description

jcvi website  

Collection of Python libraries to parse bioinformatics files, or perform computation related to assembly, annotation, and comparative genomics.

Environment Modules

Run module spider jcvi to find out what environment modules are available for this application.

System Variables

  • HPC_JCVI_DIR - installation directory
  • HPC_JCVI_BIN - executable directory




Citation

If you publish research that uses jcvi you have to cite it as follows:

Tang et al. (2008) Synteny and Collinearity in Plant Genomes.


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