Varnorm
Revision as of 21:29, 6 December 2019 by Moskalenko (talk | contribs) (Text replacement - "#uppercase" to "uc")
Description
Normalize variants in VCF file using left-aligned normalization. Basically a wrapper around Counsyl's hgvs package.
Required Modules
Serial
- gcc/5.2.0
- varnorm
System Variables
- HPC_VARNORM_DIR - installation directory
- HPC_VARNORM_BIN - executable directory