Starseqr
Revision as of 21:24, 6 December 2019 by Moskalenko (talk | contribs) (Text replacement - "#uppercase" to "uc")
Description
RNA Fusion Detection and Quantification using STAR.
Post-alignment run times are typically <20 minutes using 4 threads. Development is still ongoing and several features are currently in the works. DNA breakpoint detection is still experimental.
Environment Modules
Run module spider starseqr to find out what environment modules are available for this application.
System Variables
- HPC_STARSEQR_DIR - installation directory
- HPC_STARSEQR_BIN - executable directory