MEME

From UFRC
Revision as of 21:21, 6 December 2019 by Moskalenko (talk | contribs) (Text replacement - "#uppercase" to "uc")
Jump to navigation Jump to search

Description

meme website  
The MEME Suite allows you to:

  • Discover motifs using MEME or GLAM2 on groups of related DNA or protein sequences.
  • Search sequence databases using motifs.
  • Compare a motif to all motifs in a database of motifs, and.
  • Associate motifs with Gene Ontology terms via their putative target genes.


Environment Modules

Run module spider meme to find out what environment modules are available for this application.

System Variables

  • HPC_MEME_DIR - installation directory
  • HPC_MEME_BIN - executable directory
  • HPC_MEME_DOC - documentation directory