GetOrganelle

From UFRC
Revision as of 21:21, 6 December 2019 by Moskalenko (talk | contribs) (Text replacement - "#uppercase" to "uc")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to navigation Jump to search

Description

getorganelle website  

This toolkit assemblies organelle genome from genomic skimming data.

Environment Modules

Run module spider getorganelle to find out what environment modules are available for this application.

System Variables

  • HPC_GETORGANELLE_DIR - installation directory
  • HPC_GETORGANELLE_BIN - executable directory




Citation

If you publish research that uses getorganelle you have to cite it as follows:

Jian-Jun Jin*, Wen-Bin Yu*, Jun-Bo Yang, Yu Song, Ting-Shuang Yi, De-Zhu Li. 2018. GetOrganelle: a fast and versatile toolkit for accurate de novo assembly of organelle genomes. bioRxiv, 256479.


Retrieved from "https://help.rc.ufl.edu/mediawiki/index.php?title=GetOrganelle&oldid=18966"