Description

DSSP website

The DSSP program was designed by Wolfgang Kabsch and Chris Sander to standardize secondary structure assignment. DSSP is a database of secondary structure assignments (and much more) for all protein entries in the Protein Data Bank (PDB). DSSP is also the program that calculates DSSP entries from PDB entries. DSSP does not predict secondary structure.

Required Modules

modules documentation

Serial (with Intel compiler)

intel/2013
{{#lowercase:DSSP}}

Serial (with GCC)

gcc/4.7.2
{{#lowercase:DSSP}}

System Variables

HPC_DSSP_DIR - installation directory
HPC_DSSP_BIN - executable directory

Validation

Validated 4/5/2018

DSSP