BIOMART
Revision as of 21:12, 6 December 2019 by Moskalenko (talk | contribs) (Text replacement - "#uppercase" to "uc")
Description
Tables of Ensembl data can be downloaded via the highly customisable BioMart data mining tool. The BioMart Perl API allow you to go a step further with BioMart and allow you to integrate BioMart Perl Code into custom Perl scripts.
Environment Modules
Run module spider biomart to find out what environment modules are available for this application.
System Variables
- HPC_BIOMART_DIR - installation directory
- HPC_BIOMART_BIN - executable directory
- HPC_BIOMART_CONF - configuration directory