SNAP
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Description
SNAP is a general purpose gene finding program suitable for both eukaryotic and prokaryotic genomes. SNAP is an acroynm for Semi-HMM-based Nucleic Acid Parser.
Environment Modules
Run module spider snap to find out what environment modules are available for this application.
System Variables
- HPC_{{#uppercase:snap}}_DIR - installation directory
Citation
If you publish research that uses snap you have to cite it as follows:
Faster and More Accurate Sequence Alignment with SNAP. Matei Zaharia, William J. Bolosky, Kristal Curtis, Armando Fox, David Patterson, Scott Shenker, Ion Stoica, Richard M. Karp, and Taylor Sittler. arXiv:1111.5572v1, November 2011.